GATK2 Unified Genotyper (Public)

Run GATK2 on paired end reads and perform variant calls using Unified Genotyper. To run this pipeline, click on Run a pipeline and select “Demo GATK2 Pipeline”. Feel free to use "PGP HU34D5B9 “FASTQ” exome" as the input data set, which is 2 sets of paired end fastq files.