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Getting Started with Arvados
What you're looking at right now is Workbench, the graphical interface to the Arvados system.
Running the Pathomap pipeline in Arvados.
Click the Next > button below for a speed tour of Arvados.
Note: You can always come back to this Getting Started guide by clicking the in the upper-right corner.
Input fastq files and call variants using Platypus!
In order to run this pipeline, you can create a free account on the Curoverse home page. Then follow the instructions in the tutorial to use the test data or input your own data!